Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810821.1_cds_XP_016496371.1_10599
CDS Infomation

[gene=LOC107815324] [db_xref=GeneID:107815324] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016496371.1] [location=6773..8113] [gbkey=CDS]
Sequence

ATGCTCAGACTTATTGGTAGACGTGGATGTTTCTCTGCTGAACTAAATACATCAATTGCA
TTCTTGTTCATAGATTCTTCAGCAATCTTGCAATGGCACCGATCAATGACCACCAGTAAA
AGAGTCCAAGACAGAAGCAAGAGGAAGCGGGTGCATGACCTTGAAATAGCCACAGAAAAG
CACAAGGTCCTCTCCAAAGTCCTATTAATATTTGAAGTCCTCAAACAGGAGCCTCAACAA
ATCATATCAATTAGGGAACTTGATCAGTATAGGAGGCAAATAAACCTCCCAAAGCCCCAT
AAAATCTCGGCTTTTCTACGGAAGTCCCCCAAGCTCTTTGAACTGTACAAGGATCATAGA
GGGATTTTATGGTGTGGTATGACAAAGGAGGCTGAAGGTTTAGTCCAAGAAGAGGAGGCT
ATTATTGAGCAGCAGAGTGATAACGCTGCAGAGCTTGTAACTAGGATGCTGATGATGTCC
GTAGACAAGCGCCTTGCCTTAGATAAGATTGTTCATTTCAGAAGAGATTTGGGGTTGCCA
ATGGATTTTAGGAACCATTGGGTGCACAGATTTCCTGATTACTTTAGAGTTGTTCATCCA
TTTAAACCTTATGATGAAAGTGAGTATTTAGAGCTTGTGAATTGGAGATCGAGTTGGGCT
ATGACAGGGTTAGAAAGGAAGGCTCTGGGTGGTATGCAGGCCCCAGATGATCACGTAGCT
GGTCTTCTTTCCTTGTCTTTCCCAATGAAATTCCCACCTGATTATAAACAAATTTTGTCT
AGATATAAGGGGAAGATAGAGAATTTTCAGAAGCGGGAATACTTGTCGCCTTATGCAGAT
GCCAGGGAACTAAAGGCTGGAACACTGGAGTTTAATAAGAGGGCGGTTGCAGTGATTCAT
GAGCTGCTGAGCTTTACAATCGAAAAGAGGTTGGTGACAGATTATCTGACACATTTTAGG
AGGGAGTTCGTAATGCCTCAGAAGCAGATGAGGCTGTTGCTTAAACATTTTGGAATCTTT
TATGTTTCAGAAAGGGGTAAGAGGTTTCATGTATTTCTTAATAGTGCTTATGAAGGTTCT
GAGTTGATTGAGAAGCACCCTTTGACTGTTTGGAGAGAAAAGGTTCTAAGCTTTGTTGGA
TACAGAAAGAAGAAGGAAACAATGGATACTCTTGAAGATTTGCAGGAATTCGTGGATGAT
GATTTGCTTGAGAATGAGTCAGAATATGAACGTGTTCACGTGGAAAATAACAAGCATAAT
ATGGGTAGTTTGGAGGGAGATCTTCTGGAAGATGAATCTGAGATGGAGATTGAAGATGTT
TATAGTGCATACAGGGAATGA

Peptide Sequence

PEP ID

XP_016496371.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MLRLIGRRGCFSAELNTSIAFLFIDSSAILQWHRSMTTSKRVQDRSKRKRVHDLEIATEK
HKVLSKVLLIFEVLKQEPQQIISIRELDQYRRQINLPKPHKISAFLRKSPKLFELYKDHR
GILWCGMTKEAEGLVQEEEAIIEQQSDNAAELVTRMLMMSVDKRLALDKIVHFRRDLGLP
MDFRNHWVHRFPDYFRVVHPFKPYDESEYLELVNWRSSWAMTGLERKALGGMQAPDDHVA
GLLSLSFPMKFPPDYKQILSRYKGKIENFQKREYLSPYADARELKAGTLEFNKRAVAVIH
ELLSFTIEKRLVTDYLTHFRREFVMPQKQMRLLLKHFGIFYVSERGKRFHVFLNSAYEGS
ELIEKHPLTVWREKVLSFVGYRKKKETMDTLEDLQEFVDDDLLENESEYERVHVENNKHN
MGSLEGDLLEDESEMEIEDVYSAYRE

Transcript Sequence

Gene sequence data has not been registered.